Cutting depth not right

I am attempting m first cutting board, the cuts look great, smooth and precise. The problem I have is it’s not going deep enough, my 1/4 in cuts are less the 1/8 in and my 3/4 in cuts are about 1/4 in is there any way of changing the depth of cuts for my machine to match the depth of my cuts?

Did you calibrate your z-axis? Have a look here

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What type of bit are you using?
If you’re using a v bit then the bit will only go as deep as needed to to cover the width of the line.